Publications employing our PreOmics iST or iST-NHS technologies

  1. Kulak et al. (2014)
    Minimal, encapsulated proteomic-sample processing applied to copy-number estimation in eukaryotic cells.
    Nat Methods. Mar;11(3):319–24
  2. Grassl et al. (2014)
    Ultra-deep and quantitative saliva proteome reveals dynamics of the oral microbiome.
    Genome Med. Apr 21;8(1):44
  3. Geyer et al. (2016)
    Plasma Proteome Profiling to Assess Human Health and Disease.
    Cell Syst. Mar 23;2(3):185–95
  4. Geyer et al. (2016)
    Proteomics reveals the effects of sustained weight loss on the human plasma proteome.
    Mol Syst Biol. Dec 22;12(12):901
  5. Kulak et al. (2017)
    Loss-less nano-fractionator for high sensitivity, high coverage proteomics.
    Mol Cell Proteomics. Apr;16(4):694–705
  6. Sielaff et al. (2017)
    Evaluation of FASP, SP3, and iST Protocols for Proteomic Sample Preparation in the Low Microgram Range.
    J Proteome Res. Nov 3;16(11):4060–4072
  7. Doll et al. (2017)
    Region and cell-type resolved quantitative proteomic map of the human heart.
    Nat Commun. Nov 13;8(1):1469
  8. Karg et al. (2017)
    Ubiquitome Analysis Reveals PCNA-Associated Factor 15 (PAF15) as a Specific Ubiquitination Target of UHRF1 in Embryonic Stem Cells.
    J Mol Biol. Dec 8;429(24):3814–3824
  9. Musa et al. (2018)
    Comprehensive Proteomic Investigation of Ebf1 Heterozygosity in Pro‑B Lymphocytes Utilizing Data Independent Acquisition.
    J Proteome Res. Jan 5;17(1):76–85
  10. Meier et al. (2018)
    BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes.
    Nat Methods. Jun;15(6):440–44
  11. Dragoi et al. (2018)
    Proteomics Analysis of Monocyte-Derived Hepatocyte-Like Cells Identifies Integrin Beta 3 as a Specific Biomarker for Drug-Induced Liver Injury by Diclofenac.
    Front Pharmacol. Jul 4;9:699
  12. Virreira Winter et al. (2018)
    EASI-tag enables accurate multiplexed and interference-free MS2-based proteome quantification.
    Nat Methods. Jul;15(7):527–530
  13. Doll et al. (2018)
    Rapid proteomic analysis for solid tumors reveals LSD1 as a drug target in an end-stage cancer patient.
    Mol Oncol. Aug;12(8):1296–1307
  14. Bache et al. (2018)
    A novel LC system embeds analytes in pre-formed gradients for rapid, ultra-robust proteomics.
    Mol Cell Proteomics. Nov;17(11):2284–2296
  15. Murgia et al. (2018)
    Single fiber proteomics of respiratory chain defects in mitochondrial disorder.
    bioRxiv Sep 20, doi: https://doi.org/10.1101/421750
  16. Geyer et al. (2018)
    Plasma Proteome Profiling to detect and avoid sample-related biases in biomarker studies.
    bioRxiv Nov 30, doi: https://doi.org/10.1101/478305
  17. Meier et al. (2018)
    Online parallel accumulation - serial fragmentation (PASEF) with a novel trapped ion mobility mass spectrometer.
    Mol Cell Proteomics. Dec;17(12):2534–2545
  18. Wewer Albrechtsen et al. (2018)
    Plasma Proteome Profiling Reveals Dynamics of Inflammatory and Lipid Homeostasis Markers after Roux-En-Y Gastric Bypass Surgery.
    Cell Syst. Dec 26;7(6):601–612.e3
  19. Vilhena et al. (2019)
    Importance of Pyruvate Sensing and Transport for the Resuscitation of Viable but Nonculturable Escherichia coli K-12.
    J Bacteriol. Jan 11;201(3). pii: e00610–18.
  20. Wichmann et al. (2019)
    MaxQuant.Live enables global targeting of more than 25,000 peptides.
    Mol Cell Proteomics. Feb 12. pii: mcp.TIR118.001131
  21. Niu et al. (2019)
    Plasma proteome profiling discovers novel proteins associated with non‐alcoholic fatty liver disease.
    Mol Syst Biol. Mar 1;15(3):e8793
  22. Luedin et al. (2019)
    Mixotrophic Growth Under Micro-Oxic Conditions in the Purple Sulfur Bacterium “Thiodictyon syntrophicum”.
    Front Microbiol. Mar 5;10:384
  23. Sacco et al. (2019).
    Phosphoproteomics Reveals the GSK3-PDX1 Axis as a Key Pathogenic Signaling Node in Diabetic Islets.
    Cell Metab. Mar 7. pii: S1550-4131(19)30076–2.
  24. Naamati et al. (2019)
    Functional proteomic atlas of HIV infection in primary human CD4+ T cells.
    Elife. Mar 12;8. pii: e41431
  25. Higashi et al. (2019)
    A Study into the ADP-Ribosylome of IFN-γ-Stimulated THP‑1 Human Macrophage-like Cells Identifies ARTD8/PARP14 and ARTD9/PARP9 ADP-Ribosylation.
    J Proteome Res. 2019 Apr 5;18(4):1607–1622